<< Chapter < Page Chapter >> Page >
The brain has the ability to build an internal map of its environment, and an active area of research concerns understanding how the brain performs this important function. One type of cell believed to play a vital role is known as a grid cell. Many experiments are being performed in which the researcher records the firing patterns of grid cells as a rat explores an environment, and it is often necessary to simulate these experiments. This module explains how to set the grid, simulate the rat's motion, calculate the rat's distance to the grid, and determine the firing pattern of a grid cell.

Introduction

A network spanning several regions in the brain provides the mechanisms for spatial representation. The hippocampus, a center for both learning and memory, is an important component of this network (O'Keefe and Nadel  [link] ). The majority of cells in the hippocampus will primarily spike at one location in an environment. These cells, known as place cells, can collectively represent the position within an environment (Solstad et al.  [link] ). One large source of input to place cells are a group of cells in the medial entorhinal cortex (MEC) known as grid cells, which primarily spike in hexagonal patterns in the environment (Witter and Moser  [link] ). Thus, in order to understand the brain's spatial representation of its environment, it is essential to understand the behavior of grid cells in the MEC, place cells in the hippocampus, and the interaction between them. The work presented here focuses on one portion of this problem: modelling grid cells. We consider the setting of a rat exploring a rectangular enclosure, but this model could easily be extended to a variety of settings.

Properties of the grid

To simulate the behavior of a grid cell, it is first necessary to set its grid. We parameterize a grid with three scalars, the tilt

0 θ < π / 3 ,

the base length

0 < b < ,

and the offset δ = ( ρ , φ ) , which has a magnitude

0 < ρ < b

and a direction

0 φ < 2 π .

We will make frequent use of the grid height

h = b tan ( π / 3 ) / 2

and grid center

c = ( ρ cos φ , ρ sin φ ) .

The set of grid points, G ( θ , b , δ ) , forms hexagonal patterns. This set is the union of two sets, G 1 ( θ , b , δ ) and G 2 ( θ , b , δ ) , that are staggered with respect to each other. The set is defined by

G ( θ , b , δ ) = G 1 ( θ , b , δ ) G 2 ( θ , b , δ ) ,

where

G 1 ( θ , b , δ ) = c + k b ( cos θ , sin θ ) + 2 j h ( - sin θ , cos θ ) : j , k Z ,
G 2 ( θ , b , δ ) = c + ( k + ( 1 / 2 ) ) b ( cos θ , sin θ ) + ( 2 j - 1 ) h ( - sin θ , cos θ ) : j , k Z .

[link] shows an example of G , where the elements of G 1 are marked with black circles, and the elements of G 2 are marked with red diamonds. The three grid parameters, height, and center are also shown.

The latitudes of the grid have slope m = tan θ . The grid meridian, M , is the line that intersects the grid center and runs perpendicular to the grid latitudes, given by

M = ( y 1 , y 2 ) 2 : y 2 = c 2 - y 1 - c 1 m if θ 0 ,
M = ( y 1 , y 2 ) 2 : y 1 = 0 if θ = 0 .

The grid meridian is marked with a bold line in [link] .

Graphical demonstration of parameters. This plot shows an example of a grid, G ( θ , b , δ ) , where θ = 0 . 925 , b = 1 . 146 , ρ = 0 . 496 , and φ = 0 . 925 . The black circles and red diamonds represent the elements of G 1 and G 2 , respectively. We have drawn a large circle around the grid center, c .

Questions & Answers

what is biology
Hajah Reply
the study of living organisms and their interactions with one another and their environments
AI-Robot
what is biology
Victoria Reply
HOW CAN MAN ORGAN FUNCTION
Alfred Reply
the diagram of the digestive system
Assiatu Reply
allimentary cannel
Ogenrwot
How does twins formed
William Reply
They formed in two ways first when one sperm and one egg are splited by mitosis or two sperm and two eggs join together
Oluwatobi
what is genetics
Josephine Reply
Genetics is the study of heredity
Misack
how does twins formed?
Misack
What is manual
Hassan Reply
discuss biological phenomenon and provide pieces of evidence to show that it was responsible for the formation of eukaryotic organelles
Joseph Reply
what is biology
Yousuf Reply
the study of living organisms and their interactions with one another and their environment.
Wine
discuss the biological phenomenon and provide pieces of evidence to show that it was responsible for the formation of eukaryotic organelles in an essay form
Joseph Reply
what is the blood cells
Shaker Reply
list any five characteristics of the blood cells
Shaker
lack electricity and its more savely than electronic microscope because its naturally by using of light
Abdullahi Reply
advantage of electronic microscope is easily and clearly while disadvantage is dangerous because its electronic. advantage of light microscope is savely and naturally by sun while disadvantage is not easily,means its not sharp and not clear
Abdullahi
cell theory state that every organisms composed of one or more cell,cell is the basic unit of life
Abdullahi
is like gone fail us
DENG
cells is the basic structure and functions of all living things
Ramadan
What is classification
ISCONT Reply
is organisms that are similar into groups called tara
Yamosa
in what situation (s) would be the use of a scanning electron microscope be ideal and why?
Kenna Reply
A scanning electron microscope (SEM) is ideal for situations requiring high-resolution imaging of surfaces. It is commonly used in materials science, biology, and geology to examine the topography and composition of samples at a nanoscale level. SEM is particularly useful for studying fine details,
Hilary
cell is the building block of life.
Condoleezza Reply
Got questions? Join the online conversation and get instant answers!
Jobilize.com Reply

Get Jobilize Job Search Mobile App in your pocket Now!

Get it on Google Play Download on the App Store Now




Source:  OpenStax, The art of the pfug. OpenStax CNX. Jun 05, 2013 Download for free at http://cnx.org/content/col10523/1.34
Google Play and the Google Play logo are trademarks of Google Inc.

Notification Switch

Would you like to follow the 'The art of the pfug' conversation and receive update notifications?

Ask