<< Chapter < Page Chapter >> Page >

We then plot the results on a 2-D plane using imagesc() . This function associates colors with the values in the matrix, so that you can see where the values in the matrix are larger. Thus we get a pretty picture as above.

Testing the spectrogram

For the first test, we will try a simple sin wave.

For the second test, we will use a more interesting function. Below we have plotted sin ( 6 * 2 π t ) + sin ( 20 * 2 π t ) + 2 * sin ( e t / 1 . 5 ) over [ 0 , 10 ] .

a dog on a bed
An interesting signal to decompose.

This function is interesting because it contains a frequency component that is changing over time. While we have waves at a constant 6 and 20 Hertz, the third component speeds up as t gets larger and the exponential curve gets steeper. Thus for the plot we expect to see a frequency component that is increasing. This is exactly what we see in [link] –two constant bands of frequency, and one train of frequency that increases with time.

>> dt = 1e-4;>> t = 0:sr:10;>> y = sin(6*2*pi*t)+sin(20*2*pi*t)+2*sin(exp(t/1.5));>> my_stft(y, dt, 5000);
a dog on a bed
The spectrogram of the above function

Application to eeg data

For the final section, we will analyze actual brain waves. We recorded from and EEG, and got the signal in [link] .

a dog on a bed
An EEG wave.

To analyze, we find the time-step in the data, then call mysgram(). This gives us the plot below.

a dog on a bed

Compare the spectrogram to the raw signal. What do you notice? Perhaps the most notable change is the significant increase in signal magnitude near 18 seconds. This is reflected in the spectrogram with the brighter colors. Also, several "dominant" frequencies emerge. Two faint bands appear at 10 Hz 4 Hz for the first half of the signal. In the last section, a cluster of frequencies between 6 and 10 Hz dominate. Many of the patterns are hidden behind the subtleties in the data, however. Decoding the spectrogram is at least as difficult and creating it. Indeed, it is much less defined. The next section will explore these rules in the context of an interesting application.

Application: driving a car

One application of decoding brain waves is giving commands to a machine via brainwaves. To see developing work in this field, see this video of the company NeuroSky. Of the many machines we could command, we choose here to command a virtual car (some assembly required) that goes left or right. As above, the decision rule for such a program is not obvious. As a first try, we can find the strongest frequency for each time section and compare it to a set value. If it is lower, the car moves left, and if higher, the car moves right. The following code implements this rule:

   %load dataload bwave N = numel(eeg_sig);win_len = 3 * round(N / 60); n = 0;freq_criterion = 8; while (n+3) * win_len / 3<= N %for each time window %define the moving window and isolate that piece of signalsig_win = eeg_sig(round(n * win_len / 3) + (1:win_len));%perform fourier analysis [freq raw_amps]= myfourier(sig_win, dt, 1); %only take positive frequenciesfreq = freq((end/2+1):end); %add sine and cosine entries togethefamps = abs(sum(raw_amps(end/2:end,1), 2));%find the maximum one [a idx]= max(amps);%find the frequency corresponding to the max amplitude max_freq = freq(idx);%decided which way the car should move based on the max frequencyif max_freq<freq_criterion; fprintf('Moving left.... (fmax = %f)\n', max_freq);%this is where we put animation code elsefprintf('Moving right.....(fmax = %f)\n', max_freq); %this is where we put animation codeendpause(.5); %for dramatic effect :) n = n + 1;end

Questions & Answers

how does Neisseria cause meningitis
Nyibol Reply
what is microbiologist
Muhammad Reply
what is errata
Muhammad
is the branch of biology that deals with the study of microorganisms.
Ntefuni Reply
What is microbiology
Mercy Reply
studies of microbes
Louisiaste
when we takee the specimen which lumbar,spin,
Ziyad Reply
How bacteria create energy to survive?
Muhamad Reply
Bacteria doesn't produce energy they are dependent upon their substrate in case of lack of nutrients they are able to make spores which helps them to sustain in harsh environments
_Adnan
But not all bacteria make spores, l mean Eukaryotic cells have Mitochondria which acts as powerhouse for them, since bacteria don't have it, what is the substitution for it?
Muhamad
they make spores
Louisiaste
what is sporadic nd endemic, epidemic
Aminu Reply
the significance of food webs for disease transmission
Abreham
food webs brings about an infection as an individual depends on number of diseased foods or carriers dully.
Mark
explain assimilatory nitrate reduction
Esinniobiwa Reply
Assimilatory nitrate reduction is a process that occurs in some microorganisms, such as bacteria and archaea, in which nitrate (NO3-) is reduced to nitrite (NO2-), and then further reduced to ammonia (NH3).
Elkana
This process is called assimilatory nitrate reduction because the nitrogen that is produced is incorporated in the cells of microorganisms where it can be used in the synthesis of amino acids and other nitrogen products
Elkana
Examples of thermophilic organisms
Shu Reply
Give Examples of thermophilic organisms
Shu
advantages of normal Flora to the host
Micheal Reply
Prevent foreign microbes to the host
Abubakar
they provide healthier benefits to their hosts
ayesha
They are friends to host only when Host immune system is strong and become enemies when the host immune system is weakened . very bad relationship!
Mark
what is cell
faisal Reply
cell is the smallest unit of life
Fauziya
cell is the smallest unit of life
Akanni
ok
Innocent
cell is the structural and functional unit of life
Hasan
is the fundamental units of Life
Musa
what are emergency diseases
Micheal Reply
There are nothing like emergency disease but there are some common medical emergency which can occur simultaneously like Bleeding,heart attack,Breathing difficulties,severe pain heart stock.Hope you will get my point .Have a nice day ❣️
_Adnan
define infection ,prevention and control
Innocent
I think infection prevention and control is the avoidance of all things we do that gives out break of infections and promotion of health practices that promote life
Lubega
Heyy Lubega hussein where are u from?
_Adnan
en français
Adama
which site have a normal flora
ESTHER Reply
Many sites of the body have it Skin Nasal cavity Oral cavity Gastro intestinal tract
Safaa
skin
Asiina
skin,Oral,Nasal,GIt
Sadik
How can Commensal can Bacteria change into pathogen?
Sadik
How can Commensal Bacteria change into pathogen?
Sadik
all
Tesfaye
by fussion
Asiina
what are the advantages of normal Flora to the host
Micheal
what are the ways of control and prevention of nosocomial infection in the hospital
Micheal
what is inflammation
Shelly Reply
part of a tissue or an organ being wounded or bruised.
Wilfred
what term is used to name and classify microorganisms?
Micheal Reply
Binomial nomenclature
adeolu
Got questions? Join the online conversation and get instant answers!
Jobilize.com Reply

Get Jobilize Job Search Mobile App in your pocket Now!

Get it on Google Play Download on the App Store Now




Source:  OpenStax, The art of the pfug. OpenStax CNX. Jun 05, 2013 Download for free at http://cnx.org/content/col10523/1.34
Google Play and the Google Play logo are trademarks of Google Inc.

Notification Switch

Would you like to follow the 'The art of the pfug' conversation and receive update notifications?

Ask