<< Chapter < Page Chapter >> Page >

5' capping

While the pre-mRNA is still being synthesized, a 7-methylguanosine cap    is added to the 5' end of the growing transcript by a phosphate linkage. This moiety (functional group) protects the nascent mRNA from degradation. In addition, factors involved in protein synthesis recognize the cap to help initiate translation by ribosomes.

3' poly-a tail

Once elongation is complete, the pre-mRNA is cleaved by an endonuclease between an AAUAAA consensus sequence and a GU-rich sequence, leaving the AAUAAA sequence on the pre-mRNA. An enzyme called poly-A polymerase then adds a string of approximately 200 A residues, called the poly-A tail    . This modification further protects the pre-mRNA from degradation and signals the export of the cellular factors that the transcript needs to the cytoplasm.

Pre-mrna splicing

Eukaryotic genes are composed of exons , which correspond to protein-coding sequences ( ex- on signifies that they are ex pressed), and int ervening sequences called introns ( int- ron denotes their int ervening role), which may be involved in gene regulation but are removed from the pre-mRNA during processing. Intron sequences in mRNA do not encode functional proteins.

The discovery of introns came as a surprise to researchers in the 1970s who expected that pre-mRNAs would specify protein sequences without further processing, as they had observed in prokaryotes. The genes of higher eukaryotes very often contain one or more introns. These regions may correspond to regulatory sequences; however, the biological significance of having many introns or having very long introns in a gene is unclear. It is possible that introns slow down gene expression because it takes longer to transcribe pre-mRNAs with lots of introns. Alternatively, introns may be nonfunctional sequence remnants left over from the fusion of ancient genes throughout evolution. This is supported by the fact that separate exons often encode separate protein subunits or domains. For the most part, the sequences of introns can be mutated without ultimately affecting the protein product.

All of a pre-mRNA’s introns must be completely and precisely removed before protein synthesis. If the process errs by even a single nucleotide, the reading frame of the rejoined exons would shift, and the resulting protein would be dysfunctional. The process of removing introns and reconnecting exons is called splicing    ( [link] ). Introns are removed and degraded while the pre-mRNA is still in the nucleus. Splicing occurs by a sequence-specific mechanism that ensures introns will be removed and exons rejoined with the accuracy and precision of a single nucleotide. The splicing of pre-mRNAs is conducted by complexes of proteins and RNA molecules called spliceosomes.

Art connection

Illustration shows a spliceosome bound to mRNA. An intron is wrapped around snRNPs associated with the spliceosome. When the splice is complete, the exons on either side of the intron are fused together, and the intron forms a ring structure.
Pre-mRNA splicing involves the precise removal of introns from the primary RNA transcript. The splicing process is catalyzed by protein complexes called spliceosomes that are composed of proteins and RNA molecules called snRNAs. Spliceosomes recognize sequences at the 5' and 3' end of the intron.

Errors in splicing are implicated in cancers and other human diseases. What kinds of mutations might lead to splicing errors? Think of different possible outcomes if splicing errors occur.

Note that more than 70 individual introns can be present, and each has to undergo the process of splicing—in addition to 5' capping and the addition of a poly-A tail—just to generate a single, translatable mRNA molecule.

See how introns are removed during RNA splicing at this website .

Processing of trnas and rrnas

The tRNAs and rRNAs are structural molecules that have roles in protein synthesis; however, these RNAs are not themselves translated. Pre-rRNAs are transcribed, processed, and assembled into ribosomes in the nucleolus. Pre-tRNAs are transcribed and processed in the nucleus and then released into the cytoplasm where they are linked to free amino acids for protein synthesis.

Most of the tRNAs and rRNAs in eukaryotes and prokaryotes are first transcribed as a long precursor molecule that spans multiple rRNAs or tRNAs. Enzymes then cleave the precursors into subunits corresponding to each structural RNA. Some of the bases of pre-rRNAs are methylated; that is, a –CH 3 moiety (methyl functional group) is added for stability. Pre-tRNA molecules also undergo methylation. As with pre-mRNAs, subunit excision occurs in eukaryotic pre-RNAs destined to become tRNAs or rRNAs.

Mature rRNAs make up approximately 50 percent of each ribosome. Some of a ribosome’s RNA molecules are purely structural, whereas others have catalytic or binding activities. Mature tRNAs take on a three-dimensional structure through intramolecular hydrogen bonding to position the amino acid binding site at one end and the anticodon    at the other end ( [link] ). The anticodon is a three-nucleotide sequence in a tRNA that interacts with an mRNA codon through complementary base pairing.

The molecular model of phenylalanine tRNA is L-shaped. At one end is the anticodon AAG. At the other end is the attachment site for the amino acid phenylalanine
This is a space-filling model of a tRNA molecule that adds the amino acid phenylalanine to a growing polypeptide chain. The anticodon AAG binds the Codon UUC on the mRNA. The amino acid phenylalanine is attached to the other end of the tRNA.

Section summary

Eukaryotic pre-mRNAs are modified with a 5' methylguanosine cap and a poly-A tail. These structures protect the mature mRNA from degradation and help export it from the nucleus. Pre-mRNAs also undergo splicing, in which introns are removed and exons are reconnected with single-nucleotide accuracy. Only finished mRNAs that have undergone 5' capping, 3' polyadenylation, and intron splicing are exported from the nucleus to the cytoplasm. Pre-rRNAs and pre-tRNAs may be processed by intramolecular cleavage, splicing, methylation, and chemical conversion of nucleotides. Rarely, RNA editing is also performed to insert missing bases after an mRNA has been synthesized.

Art connections

[link] Errors in splicing are implicated in cancers and other human diseases. What kinds of mutations might lead to splicing errors? Think of different possible outcomes if splicing errors occur.

[link] Mutations in the spliceosome recognition sequence at each end of the intron, or in the proteins and RNAs that make up the spliceosome, may impair splicing. Mutations may also add new spliceosome recognition sites. Splicing errors could lead to introns being retained in spliced RNA, exons being excised, or changes in the location of the splice site.

Got questions? Get instant answers now!

Questions & Answers

What is cytoplasm
Nitta Reply
Parasitic adaptation of tapeworm
Angela Reply
Describe osmoregulator or osmoconformers and how these tools allow animals to adapt to different environment.
Alick Reply
describe the secondary function of a leaf to a plant.
Twizera Reply
hi I'm asking a question about HIV infection, can HIV infection transmitted from Mother to unbron child? please help me I So confused.
Khushboy Reply
no it can't
Ahmad
yes it can but their is an injection that can be used to prevent it.
Gift
Ahmad how no?
Khushboy
Hi im new
innocent
no, unless when giving birth
Bright
YES
Kaole
it is can be transmitted but there is an injection that the mother is injected to prevent the disease
Nia
OK
Kaole
I agree with nia
peter
what is the difference between primary and secondary active transport in detail? I didn't understand the steps in the textbook specifically
Fathima Reply
you are a doctor?
Mohammed
what is the meaning of connective tissue?
Mohammed Reply
what are the characteristics of living things
Owolo Reply
hi
Mohammed
what's the meaning of connective tissue?
Mohammed
Reproduction, adaptation, interaction, movement, growth, respiration, made of cells, responsive to environment (homeostasis), metabolic action (consumption of food converted into energy)
garret
Movement, reproduction, nutrition, irritability, growth, excretion, respiration, death, adaptation, competition
peter
state two most important factors that favour exponential growth of population of a gazelle in a pack
Eliza Reply
growth
Ben
what are the two types of electron microscope
Sharlom Reply
light microscope and early microscope
Sama
Enzymes are biological catalyst which alter any reaction and protein in nature
Nkoue Reply
Thanks
Gaudi
Your welcome sir
Nkoue
guyz you enjoying
Royd
What is translation and transcription
Nkoue
Transcription is making RNA from DNA. Translation is going from RNA to proteins.
Eric
full meaning of RNA and DNA
Charity
Nkoue what homeostits means?
Mohammed
Mohammed khalfan, In biology, homeostasis is the state of steady internal, physical, and chemical conditions maintained by living systems.[1] This dynamic state of equilibrium is the condition of optimal functioning for the organism and includes many variables, such as body temperature and fluid bal
Khushboy
what is the definition of enzymes
Royd Reply
enzymes are biological catalyst that speed up chemical reaction.
Alale
What are enzymes?
Gaudi
Enzymes are made of proteins and lower the energy of activation. In other words, they bring things together which helps to lower the amount of energy for a reaction to go forward.
Eric
they are catalyses that speeds up chemical reaction.... e.g they break down the food we consume.
Azeez
These are catalyst that speeds up the chemical reaction.
Micheal
What is connective tissue?
Mohammed
what homeostits means ?
Mohammed
what is a spirogyra
Talabi Reply
Spirogyra is a filamentous chlorophyte green algae of the order Zygnematales. It is named for the helical or spiral arrangement of the chloroplasts. That is characteristic of the genus. It is commonly found in freshwater habitats. And there are more than 400 species of Spirogyra in the world.
Eric
what is the mean of biology
Bello Reply
what is cell
Bello
A cell is the smallest living unit.
Eric
Hi I'm new in this group can someone please help with the list features shared by plants and charopytes that are not shared with most other eukaryotes
Wendy
iz a basic units of a living thing?
simongc
what is eutrophication
Chinaza Reply
hi.. I'm asking a question about HIV infection.... Can HIV infection transmitted from Mother to unbron child?
Khushboy
Eutrophication is an enrichment of water by nutrient salts that causes structural changes to the ecosystem such as: increased production of algae and aquatic plants, depletion of fish species, general deterioration of water quality and other effects that reduce and preclude use.
Khushboy

Get the best Biology course in your pocket!





Source:  OpenStax, Biology. OpenStax CNX. Feb 29, 2016 Download for free at http://cnx.org/content/col11448/1.10
Google Play and the Google Play logo are trademarks of Google Inc.

Notification Switch

Would you like to follow the 'Biology' conversation and receive update notifications?

Ask